Genome Wide Analysis of Orthologous Clusters and Plasmids
D-GENIES: dot plot large genomes in an interactive, efficient and simple way.
Dot plots are widely used to quickly compare the sequence set. They give a synthetic overview of the similarities, highlighting repetitions, rest and inversion. Different tools have been developed to be easily generated genome alignment dot plot, but they are often limited in the size of the input sequence.
D-jin is a standalone and web application partiality large genome using the software package and produce interactive minimap2 dot plot. It allows users to sort requests throughout the reference sequence, zoom in the plot and download some pictures, alignment or sequence of files. D-jin is an easy-to-install, open-source software package (GPL) developed with Python and JavaScript.
TAP: pipe targeted clinical genomics to detect RNA transcripts variants use a data-seq.
RNA-Seq is a powerful technology and cost-effective molecular diagnostic cancer and other diseases, and can reach its full potential when coupled with a clinically validated class of informatics tools. Despite recent advances in long-read sequencing, transcriptome assembly remains short beep useful and cost-effective methodology for opening rearrangements transcript levels and new isoforms. One major concern for adopting a de novo assembly approach proved RNA-seq data in the clinical setting has been a turnaround analysis. To solve this problem, we have developed a targeted approach to speed up assembly and RNA-seq data analysis.
RESULTS
D-GENIES: dot plot large genomes in an interactive, efficient and simple way.
oriTfinder: Web-based tool for the identification of the origin of the transfer in the DNA sequence of mobile genetic elements of bacteria.
oriTfinder is a web server that facilitates the rapid identification of the origin of transfer site (Orit) of conjugative plasmids or integrative and conjugative elements chromosome-borne. back-end database used oriTDB built on more than a thousand local phone Orit known bacterial genetic element (MGEs) and known relaxases MGE-encoding and Type IV coupling protein (T4CP).
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human rhinovirus A serotype 89. This antibody is Unconjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Hepatitis C virus genotype 1a. This antibody is Unconjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human enterovirus 71. This antibody is Unconjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Dengue virus. This antibody is Unconjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human rhinovirus A serotype 89. This antibody is HRP conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human rhinovirus A serotype 89. This antibody is FITC conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human rhinovirus A serotype 89. This antibody is Biotin conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Hepatitis C virus genotype 1a. This antibody is HRP conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Hepatitis C virus genotype 1a. This antibody is FITC conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Hepatitis C virus genotype 1a. This antibody is Biotin conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human enterovirus 71. This antibody is HRP conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human enterovirus 71. This antibody is FITC conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Human enterovirus 71. This antibody is Biotin conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Dengue virus. This antibody is HRP conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Dengue virus. This antibody is FITC conjugated. Tested in the following application: ELISA
Buffer: Preservative: 0.03% Proclin 300 Constituents: 50% Glycerol, 0.01M PBS, PH 7.4 >95%, Protein G purified
Description: A polyclonal antibody against Genome polyprotein. Recognizes Genome polyprotein from Dengue virus. This antibody is Biotin conjugated. Tested in the following application: ELISA
With the combination of similarity search for Orit nucleotide sequence oriTDB-archive and co-localization of homologous genes flanking relaxase, oriTfinder can predict Orit region with high accuracy in the DNA sequences of the bacterial plasmid or chromosome in a few minutes. The server also detects other transfer related modules, including a potential relaxase genes, gene T4CP and type IV secretion system gene cluster, and the putative gene coding for virulence factors and antibiotic resistance determinants acquired. oriTfinder can contribute to meet the increasing demands for the re-annotation of bacterial conjugative, mobilizable elements or non-transferable and aid in the rapid accession risk of disease-relevant properties of the spread of bacterial pathogens of interest.
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